⚠Due to planned maintenance you will experience short (<30 min) downtime between 08:00 - 08:30 CET.
To be updated
Purpose
Upload and download files in Data Manager can be done using various mechanisms :
- Web-based interface at https://sandbox-datamanager.wmda.info (please note the URL for production is https://datamanager.wmda.info )
- REST API, using commands like cURL, or libraries like Restsharp
This document describes the Data Manager mechanism via the REST API method, where users can upload a PGP encrypted XML file.
Important note on security
The examples below are for educational purposes: WMDA
Please do read https://ec.haxx.se/usingcurl-netrc.html on the use of Bearer Token if you plan to automate these procedures.
# example use: curl --netrc-file mycredentialsfile https://xyz.com # the mycredentialsfile contains : machine <xyz.com> login <johndoe@xyz.com> password <uf9873o^9ufwa>
Using the REST API
Step 1: Request the credential which can be used to generate the Bear Token
Step 2: Test to use the API in WMDA
To test the API you may use a tool like Restlet or Postman, a plugin for Chrome browsers to test API calls before you deploy. The server responds with a HTTP code 200 in when successful, but the response body may contain detailed error messages.
In case the upload succeeded, an XML response with meta information of the upload is generated. You may use this for own logging purposes. For more info you can read the full API specification.
URL | |
---|---|
SERVER URL | Staging system: https://staging-dataupload.wmda.info Production system: https://dataupload.wmda.info |
URI | /api/v2/io/ION1234/ Explanations:
|
METHOD | PUT |
Full URL path example | For donor for organization with ION-1234, the full path is as below: https://staging-dataupload.wmda.info/api/v2/io/ION1234/ION-1234-D.gpg |
HEADER | Authorization and Content-Type are required, the other ones are optional |
Authorization | basic |
Content-Type | application/octet-stream (when your file < 128K) multipart/form-data (when your file >128K) From , Content-Type is required. |
cX-Rename-If-Exists | true |
- Server name should be https://staging-dataupload.wmda.info
- For production you will need https://dataupload.wmda.info
SAMPLE Request
First test the connection by using the right path and fetching the metadata : it should result in a response 200 OK.
- Look carefully at the path : here we use ion0999, that should be replaced by your ION.
- You may notice that we add the filename to the path: depending on the library you may need to add that
Upload
Now we know the path is correct and we can do an upload using cURL:
Below is the invalid to deploy, currently it is still available in PRODUCTION till production maintenance. But not available any more in STAGING dataupload.
Invalid after update from Oct, 27, 2022
curl -i -X PUT -H "Authorization:Basic d21.....uZT==" -T "./test.pgp" 'https://staging-dataupload.wmda.info/api/v2/io/ION0999/'
Below are suggestions with more secure headers:
The curl script needs update to upload in STAGING from Oct, 27th, 2022 after maintenance/update . And the new suggested script can be used in PRODUCTION as well. So we strongly suggest API users to update, then there will be less stress after PRODUCTION update/maintenance.
For registries use other script, please test in STAGING as well, and adjust with the Content-Type if not used before. We noticed that the uploaded file format can be binary or with info to identify it is PGP/GPG MESSAGE. And for PGP/GPG MESSAGE format, there are more solutions.
Suggestion 1:
For all the files, script as below is suggested for file larger than 128K.
Curl for linux
curl -i -X PUT -H "Authorization:Basic d21.....uZT==" -H "Content-Type: multipart/form-data" --data-binary "@/path/to/file/ION-0999-D.gpg" "https://staging-dataupload.wmda.info/api/v2/io/ION0999/" -H "X-File-Name:ION-0999-D.gpg"
Curl for windows
curl -i -X PUT -H "Authorization:Basic d21.....uZT==" -H "Content-Type: multipart/form-data" --data-binary "@c:/path/to/file/ION-0999-D.gpg" "https://staging-dataupload.wmda.info/api/v2/io/ION0999/" -H "X-File-Name:ION-0999-D.gpg"
Suggestion 2:
For files that encrypted and identified as PGP/GPG MESSAGE (open the encrypted file and you can see this info), then -F and -H options also work. -F already included "Content-Type: multipart/form-data", so no need to provide it any more.
For binary file, extra header information will be added to the content of the file when file is uploaded, and then it can not be decrypted any more, so please use suggestion 1 to upload.
Curl for linux
curl -i -X PUT -H "Authorization:Basic d21.....uZT==" -F "file="@/path/to/file/ION-0999-D.gpg" "https://staging-dataupload.wmda.info/api/v2/io/ION0999/" -H "X-File-Name:ION-0999-D.gpg"
Curl for linux
curl -i -X PUT -H "Authorization:Basic d21.....uZT==" -F "file="@c:/path/to/file/ION-0999-D.gpg" "https://staging-dataupload.wmda.info/api/v2/io/ION0999/" -H "X-File-Name:ION-0999-D.gpg"
FAQ
Question : My report states : File could not be processed due to a file decryption error, when using the API
Answer :
Download
Download reports
You may use the API also to fetch your reports . Unfortunately, it is not one line cmd, and need 2 steps.
1.Fetch the files list and get the file names.
Use the following curl and endpoint to fetch an array with filedescriptors: url should use double quote or no quote in windows env:
curl -H "Authorization:Basic d21.....uZT==" https://staging-dataupload.wmda.info/api/v2/fs/reports-ion0999/?children=f
You will get the result in xml format, and you can get json format, use the cmd below:
curl -H "Authorization:Basic d21.....uZT==" https://staging-dataupload.wmda.info/api/v2/fs/reports-ion0999/?children=f&format=json
2. Fetch all the reports or the one you need.
Note, you need to use "io" instead of "fs" in the path.
curl -O GET -H "Authorization:Basic d21.....uZT==" 'https://staging-dataupload.wmda.info/api/v2/io/reports-ion0999/$filename' -o '$filename.txt'
In windows cmd, the -o dose not work, and the cmd is as below:
curl -H "Authorization:Basic d21.....uZT==" https://staging-dataupload.wmda.info/api/v2/io/reports-ion0999/$filename > $filename.txt
Download archived files
Download archived files will be the same as download reports. And 2 steps as above are needed.
The example URL for archive folder is as below:
https://staging-dataupload.wmda.info/api/v2/fs/archive-ion0999/?children=f
In RESTLET :
Click on Code to get raw CURL syntax:
Response should be 200:
Download full dataset
For those registries that are permitted to use the full dataset the statement below will fetch that. Please change the ION workspace to match your ION.
curl -O GET -H "Authorization:Basic .............." 'https://dataupload.wmda.info/api/v2/io/downloads/ION1804/bmdw4data.zip.gpg' -o 'wmda_data_v22.zip.gpg'
In windows cmd, the -o dose not work, and the cmd is as below:
curl -H "Authorization:Basic .............." "https://dataupload.wmda.info/api/v2/io/downloads/ION1804/bmdw4data.zip.gpg" > wmda_data_v22.zip.gpg
We noticed sometimes the download maybe terminated because of some temp network limitation, and the "-C -" option can be used to continue the download.
-v is for more details of the track info
curl -v -H "Authorization:Basic .............." -o 'wmda_data_v22.zip.gpg' -C - 'https://dataupload.wmda.info/api/v2/io/downloads/ION1804/wmda_data_v22.zip.gpg'